Editing GSCAN (section)

=== Phenotype definitions and analysis plan ===
The analysis plan and phenotypes are described in files linked below (makes it easier to keep track of versioning!). Coding of phenotypes is described in the aptly-named "phenotype definitions" file whereas the genome-wide analysis plan is in the all-too-aptly-named "analysis plan" document. Please note that the phenotype definitions document only contains information on how to code the eight smoking/drinking phenotypes. File formats for those phenotypes, which many will recognize as standard pedigree formats, are included in the analysis plan. Everything else should be fairly straightforward.

[[Media:GSCAN_GWAS_ANALYSIS_PLAN-v1.4.docx | Click here to find the GSCAN GWAS analysis plan.]]

[[Media:GSCAN_GWAS_Phenotype_Definitions-2-24-2016.pdf | Click here to find the GSCAN GWAS phenotype definitions.]]