Difference between revisions of "PSYC 7102: Statistical-Genetics"
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watch qstat ### Refreshes "qstat" every second. | watch qstat ### Refreshes "qstat" every second. | ||
| − | ### | + | ### Submit interactive pbs job in the short queue for 23 hours on 1 node with 22 CPUs |
| − | qsub -I -q short -l walltime=23:00:00 -l nodes=1:ppn= | + | ### Having 22 or 23 CPUs is helpful when you're running per-chromosome jobs. |
| + | qsub -I -q short -l walltime=23:00:00 -l nodes=1:ppn=22 | ||
</syntaxhighlight> | </syntaxhighlight> | ||
Revision as of 00:44, 14 November 2015
Homework
Command Line and Other Coding Resources
Code Samples (Please add!)
Here are some useful server management tools
df -h ### Show space availability in all directories
df -h /directory ### Show disk space in /directory
top ### Show resource utilization and job status, etc.
htop ### Souped up "top"
PBS batch queuing (used on vieques and research computing)
### PBS batch system utilities
qstat ### On PBS batch system shows status of submitted jobs
watch qstat ### Refreshes "qstat" every second.
### Submit interactive pbs job in the short queue for 23 hours on 1 node with 22 CPUs
### Having 22 or 23 CPUs is helpful when you're running per-chromosome jobs.
qsub -I -q short -l walltime=23:00:00 -l nodes=1:ppn=22