UK Biobank/file locations: Difference between revisions
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Created page with "The files are on RC in <pre> /work/KellerLab/UKBiobank </pre>" |
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/work/KellerLab/UKBiobank | /work/KellerLab/UKBiobank | ||
</pre> | </pre> | ||
The phenotypes are in an Rdata file that can be read in with a line such as | |||
<pre> | |||
load(file="/work/KellerLab/UKBiobank/phenotypes/uk1653.Rdata") | |||
</pre> | |||
The data is all in an object called "bd". | |||
The raw genetic data is under the directory | |||
<pre> | |||
/work/KellerLab/UKBiobank/genetics/raw | |||
</pre> | |||
it is in vcf.gz, bed, and UK Biobank cal format in the so named directories. | |||
Revision as of 04:45, 25 February 2016
The files are on RC in
/work/KellerLab/UKBiobank
The phenotypes are in an Rdata file that can be read in with a line such as
load(file="/work/KellerLab/UKBiobank/phenotypes/uk1653.Rdata")
The data is all in an object called "bd".
The raw genetic data is under the directory
/work/KellerLab/UKBiobank/genetics/raw
it is in vcf.gz, bed, and UK Biobank cal format in the so named directories.